STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A507FPM6Uncharacterized protein. (2343 aa)    
Predicted Functional Partners:
A0A507FH74
Spindle pole body component.
    
 0.825
A0A507FSC6
Spindle pole body component.
   
 0.815
A0A507E9L6
Uncharacterized protein.
    
 0.746
A0A507FLP9
Uncharacterized protein.
    
 0.733
A0A507DPM9
Tubulin domain-containing protein; Belongs to the tubulin family.
   
 0.654
A0A507DQ19
Tubulin domain-containing protein; Belongs to the tubulin family.
   
 0.654
A0A507FHE4
Uncharacterized protein; Belongs to the tubulin family.
   
 0.654
A0A507EQ21
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.626
A0A507FB04
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.626
YNK1B
Nucleoside-diphosphate kinase; Belongs to the NDK family.
    
 0.609
Your Current Organism:
Chytriomyces confervae
NCBI taxonomy Id: 246404
Other names: C. confervae, Chytridium confervae, Chytridium confervae (Wille) Minden, Chytriomyces confervae A.Batko
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.