STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_00393Uncharacterized protein. (103 aa)    
Predicted Functional Partners:
RO3G_10712
Uncharacterized protein.
    
  0.978
RO3G_12745
PRK domain-containing protein.
   
 0.847
RO3G_09010
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.840
RO3G_16057
Uncharacterized protein.
    
 0.835
RO3G_03408
Guanylate kinase.
   
 0.829
RO3G_02544
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
   
 0.822
RO3G_14093
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
   
 0.822
RO3G_01704
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
    
 0.821
RO3G_08745
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 
 0.817
RO3G_13691
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
   
 0.815
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.