STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_00558Uncharacterized protein. (81 aa)    
Predicted Functional Partners:
RO3G_14831
Uncharacterized protein.
   
 
 0.998
RO3G_08117
30S ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.997
RO3G_12202
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
  0.993
RO3G_05296
Uncharacterized protein.
   
 
 0.992
RO3G_15550
Uncharacterized protein.
   
 
 0.992
RO3G_02495
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.991
RO3G_08288
Uncharacterized protein.
   
   0.991
RO3G_09417
50S ribosomal protein L19.
   
 
 0.991
RO3G_14276
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.991
RO3G_02033
L51_S25_CI-B8 domain-containing protein.
   
 
 0.990
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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