Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RO3G_01008 | RO3G_02477 | I1BJC4 | I1BNJ3 | Adenosylhomocysteinase. | Uncharacterized protein. | 0.840 |
RO3G_01008 | RO3G_03492 | I1BJC4 | I1BRF7 | Adenosylhomocysteinase. | Uncharacterized protein. | 0.831 |
RO3G_01008 | RO3G_04908 | I1BJC4 | I1BVH3 | Adenosylhomocysteinase. | Cystathionine beta-lyase. | 0.831 |
RO3G_01008 | RO3G_04919 | I1BJC4 | I1BVI4 | Adenosylhomocysteinase. | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase. | 0.924 |
RO3G_01008 | RO3G_09411 | I1BJC4 | I1C8C1 | Adenosylhomocysteinase. | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.845 |
RO3G_01008 | RO3G_10919 | I1BJC4 | I1CCM8 | Adenosylhomocysteinase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.848 |
RO3G_01008 | RO3G_12936 | I1BJC4 | I1CIE5 | Adenosylhomocysteinase. | Uncharacterized protein. | 0.830 |
RO3G_01008 | RO3G_14414 | I1BJC4 | I1CMM3 | Adenosylhomocysteinase. | Hcy-binding domain-containing protein. | 0.848 |
RO3G_01008 | RO3G_14750 | I1BJC4 | I1CNK9 | Adenosylhomocysteinase. | Uncharacterized protein. | 0.845 |
RO3G_01008 | RO3G_16940 | I1BJC4 | I1CVD8 | Adenosylhomocysteinase. | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase. | 0.924 |
RO3G_02477 | RO3G_01008 | I1BNJ3 | I1BJC4 | Uncharacterized protein. | Adenosylhomocysteinase. | 0.840 |
RO3G_02477 | RO3G_03492 | I1BNJ3 | I1BRF7 | Uncharacterized protein. | Uncharacterized protein. | 0.912 |
RO3G_02477 | RO3G_04908 | I1BNJ3 | I1BVH3 | Uncharacterized protein. | Cystathionine beta-lyase. | 0.891 |
RO3G_02477 | RO3G_04919 | I1BNJ3 | I1BVI4 | Uncharacterized protein. | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase. | 0.744 |
RO3G_02477 | RO3G_10919 | I1BNJ3 | I1CCM8 | Uncharacterized protein. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.766 |
RO3G_02477 | RO3G_12936 | I1BNJ3 | I1CIE5 | Uncharacterized protein. | Uncharacterized protein. | 0.891 |
RO3G_02477 | RO3G_14414 | I1BNJ3 | I1CMM3 | Uncharacterized protein. | Hcy-binding domain-containing protein. | 0.766 |
RO3G_02477 | RO3G_16940 | I1BNJ3 | I1CVD8 | Uncharacterized protein. | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase. | 0.744 |
RO3G_03492 | RO3G_01008 | I1BRF7 | I1BJC4 | Uncharacterized protein. | Adenosylhomocysteinase. | 0.831 |
RO3G_03492 | RO3G_02477 | I1BRF7 | I1BNJ3 | Uncharacterized protein. | Uncharacterized protein. | 0.912 |
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