Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RO3G_01433 | RO3G_03199 | I1BKJ9 | I1BQL5 | Uncharacterized protein. | Uncharacterized protein. | 0.812 |
RO3G_01433 | RO3G_04089 | I1BKJ9 | I1BT54 | Uncharacterized protein. | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.783 |
RO3G_01433 | RO3G_07772 | I1BKJ9 | I1C3N7 | Uncharacterized protein. | Uncharacterized protein. | 0.835 |
RO3G_01433 | RO3G_09833 | I1BKJ9 | I1C9J3 | Uncharacterized protein. | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.783 |
RO3G_01433 | RO3G_10610 | I1BKJ9 | I1CBS0 | Uncharacterized protein. | Uncharacterized protein. | 0.855 |
RO3G_01433 | RO3G_10712 | I1BKJ9 | I1CC22 | Uncharacterized protein. | Uncharacterized protein. | 0.997 |
RO3G_01433 | RO3G_13172 | I1BKJ9 | I1CJ31 | Uncharacterized protein. | TPR_REGION domain-containing protein. | 0.831 |
RO3G_01433 | RO3G_13340 | I1BKJ9 | I1CJJ9 | Uncharacterized protein. | Zf-rbx1 domain-containing protein. | 0.771 |
RO3G_01433 | RO3G_15396 | I1BKJ9 | I1CQF5 | Uncharacterized protein. | Uncharacterized protein. | 0.863 |
RO3G_01433 | RO3G_16057 | I1BKJ9 | I1CSB6 | Uncharacterized protein. | Uncharacterized protein. | 0.839 |
RO3G_03199 | RO3G_01433 | I1BQL5 | I1BKJ9 | Uncharacterized protein. | Uncharacterized protein. | 0.812 |
RO3G_03199 | RO3G_10610 | I1BQL5 | I1CBS0 | Uncharacterized protein. | Uncharacterized protein. | 0.530 |
RO3G_04089 | RO3G_01433 | I1BT54 | I1BKJ9 | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | Uncharacterized protein. | 0.783 |
RO3G_07772 | RO3G_01433 | I1C3N7 | I1BKJ9 | Uncharacterized protein. | Uncharacterized protein. | 0.835 |
RO3G_07772 | RO3G_10712 | I1C3N7 | I1CC22 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
RO3G_07772 | RO3G_13172 | I1C3N7 | I1CJ31 | Uncharacterized protein. | TPR_REGION domain-containing protein. | 0.999 |
RO3G_07772 | RO3G_13340 | I1C3N7 | I1CJJ9 | Uncharacterized protein. | Zf-rbx1 domain-containing protein. | 0.797 |
RO3G_07772 | RO3G_15396 | I1C3N7 | I1CQF5 | Uncharacterized protein. | Uncharacterized protein. | 0.483 |
RO3G_07772 | RO3G_16057 | I1C3N7 | I1CSB6 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
RO3G_09833 | RO3G_01433 | I1C9J3 | I1BKJ9 | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | Uncharacterized protein. | 0.783 |
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