STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_01550CMP/dCMP-type deaminase domain-containing protein. (213 aa)    
Predicted Functional Partners:
RO3G_01385
SET domain-containing protein.
   
 0.960
RO3G_05255
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
  
 
 0.862
RO3G_04074
Thymidylate synthase.
  
 
 0.801
RO3G_06022
S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.
    
 0.786
RO3G_04527
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
    
 0.775
RO3G_07053
Thymidylate_kin domain-containing protein.
    
 0.767
RO3G_12261
Uncharacterized protein.
    
 0.765
RO3G_13378
HD_domain domain-containing protein.
   
 
  0.730
RO3G_02108
Uncharacterized protein.
    
 0.725
RO3G_12782
Uncharacterized protein; Belongs to the 5'-nucleotidase family.
    
 0.725
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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