STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_01852BZIP domain-containing protein. (476 aa)    
Predicted Functional Partners:
RO3G_00405
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 0.815
RO3G_05698
WD_REPEATS_REGION domain-containing protein.
    
  0.716
RO3G_07348
DNA ligase.
    
 0.665
RO3G_13937
Fe2OG dioxygenase domain-containing protein.
   
 0.651
RO3G_07188
Uncharacterized protein.
    
 0.641
RO3G_00430
Ubiquitin-like domain-containing protein.
    
  0.638
RO3G_06177
Ubiquitin-like domain-containing protein.
    
  0.638
RO3G_10092
Ubiquitin-like domain-containing protein.
    
  0.638
RO3G_15350
Ubiquitin-like domain-containing protein.
    
  0.638
RO3G_00921
POT1PC domain-containing protein.
    
  0.637
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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