STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_01867A to I editase domain-containing protein. (177 aa)    
Predicted Functional Partners:
RO3G_10911
SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.923
RO3G_13608
Thioredoxin; Belongs to the thioredoxin family.
    
   0.560
RO3G_13656
Thioredoxin domain-containing protein.
    
   0.560
RO3G_08050
YTH domain-containing protein.
   
 
 0.553
RO3G_16840
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 
 0.523
RO3G_06099
Uncharacterized protein.
    
 
 0.508
RO3G_03666
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
   0.503
RO3G_03940
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.503
RO3G_04096
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.503
RO3G_04159
Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.503
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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