Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RO3G_00182 | RO3G_01042 | I1BGZ8 | I1BJF8 | NAD(P)-bd_dom domain-containing protein. | UDP-glucose 6-dehydrogenase. | 0.985 |
RO3G_00182 | RO3G_01911 | I1BGZ8 | I1BLX7 | NAD(P)-bd_dom domain-containing protein. | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.881 |
RO3G_00182 | RO3G_02920 | I1BGZ8 | I1BPT6 | NAD(P)-bd_dom domain-containing protein. | Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. | 0.542 |
RO3G_00182 | RO3G_03364 | I1BGZ8 | I1BR30 | NAD(P)-bd_dom domain-containing protein. | Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family. | 0.924 |
RO3G_00182 | RO3G_03365 | I1BGZ8 | I1BR31 | NAD(P)-bd_dom domain-containing protein. | Fungal_trans domain-containing protein. | 0.924 |
RO3G_00182 | RO3G_03366 | I1BGZ8 | I1BR32 | NAD(P)-bd_dom domain-containing protein. | Uncharacterized protein. | 0.924 |
RO3G_00182 | RO3G_06381 | I1BGZ8 | I1BZP6 | NAD(P)-bd_dom domain-containing protein. | Galactokinase. | 0.669 |
RO3G_00182 | RO3G_07219 | I1BGZ8 | I1C234 | NAD(P)-bd_dom domain-containing protein. | UDP-glucose 6-dehydrogenase. | 0.985 |
RO3G_00182 | RO3G_12573 | I1BGZ8 | I1CHD2 | NAD(P)-bd_dom domain-containing protein. | Uncharacterized protein. | 0.615 |
RO3G_01042 | RO3G_00182 | I1BJF8 | I1BGZ8 | UDP-glucose 6-dehydrogenase. | NAD(P)-bd_dom domain-containing protein. | 0.985 |
RO3G_01042 | RO3G_01911 | I1BJF8 | I1BLX7 | UDP-glucose 6-dehydrogenase. | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.774 |
RO3G_01042 | RO3G_02920 | I1BJF8 | I1BPT6 | UDP-glucose 6-dehydrogenase. | Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. | 0.712 |
RO3G_01042 | RO3G_03364 | I1BJF8 | I1BR30 | UDP-glucose 6-dehydrogenase. | Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family. | 0.701 |
RO3G_01042 | RO3G_03365 | I1BJF8 | I1BR31 | UDP-glucose 6-dehydrogenase. | Fungal_trans domain-containing protein. | 0.701 |
RO3G_01042 | RO3G_03366 | I1BJF8 | I1BR32 | UDP-glucose 6-dehydrogenase. | Uncharacterized protein. | 0.701 |
RO3G_01911 | RO3G_00182 | I1BLX7 | I1BGZ8 | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | NAD(P)-bd_dom domain-containing protein. | 0.881 |
RO3G_01911 | RO3G_01042 | I1BLX7 | I1BJF8 | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | UDP-glucose 6-dehydrogenase. | 0.774 |
RO3G_01911 | RO3G_02161 | I1BLX7 | I1BMM7 | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | Aamy domain-containing protein. | 0.811 |
RO3G_01911 | RO3G_02920 | I1BLX7 | I1BPT6 | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. | 0.853 |
RO3G_01911 | RO3G_03364 | I1BLX7 | I1BR30 | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family. | 0.957 |
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