STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_02398Uncharacterized protein. (1109 aa)    
Predicted Functional Partners:
RO3G_11807
Uncharacterized protein.
   
 0.994
RO3G_00934
TFIID_20kDa domain-containing protein.
    
 0.993
RO3G_02432
TAF domain-containing protein.
    
 0.993
RO3G_11871
TAFII55_N domain-containing protein.
    
 0.993
RO3G_03276
Uncharacterized protein.
    
 0.990
RO3G_05748
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.990
RO3G_09015
Uncharacterized protein.
    
 0.990
RO3G_14111
TAF4 domain-containing protein.
    
 0.985
RO3G_15633
TAF4 domain-containing protein.
    
 0.985
RO3G_04710
Uncharacterized protein.
    
 0.978
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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