Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RO3G_01482 | RO3G_03199 | I1BKP8 | I1BQL5 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Uncharacterized protein. | 0.873 |
RO3G_01482 | RO3G_03998 | I1BKP8 | I1BSW3 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Uncharacterized protein. | 0.852 |
RO3G_01482 | RO3G_08505 | I1BKP8 | I1C5S0 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Small nuclear ribonucleoprotein F. | 0.997 |
RO3G_01482 | RO3G_11791 | I1BKP8 | I1CF50 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Small nuclear ribonucleoprotein F. | 0.997 |
RO3G_01482 | RO3G_12374 | I1BKP8 | I1CGT3 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Small nuclear ribonucleoprotein Sm D3. | 0.996 |
RO3G_01482 | RO3G_13510 | I1BKP8 | I1CK19 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Uncharacterized protein. | 0.697 |
RO3G_01482 | RO3G_15318 | I1BKP8 | I1CQ77 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
RO3G_03199 | RO3G_01482 | I1BQL5 | I1BKP8 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.873 |
RO3G_03199 | RO3G_03431 | I1BQL5 | I1BR96 | Uncharacterized protein. | Uncharacterized protein. | 0.979 |
RO3G_03199 | RO3G_03998 | I1BQL5 | I1BSW3 | Uncharacterized protein. | Uncharacterized protein. | 0.996 |
RO3G_03199 | RO3G_06852 | I1BQL5 | I1C117 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.978 |
RO3G_03199 | RO3G_08505 | I1BQL5 | I1C5S0 | Uncharacterized protein. | Small nuclear ribonucleoprotein F. | 0.869 |
RO3G_03199 | RO3G_11351 | I1BQL5 | I1CDW0 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.873 |
RO3G_03199 | RO3G_11791 | I1BQL5 | I1CF50 | Uncharacterized protein. | Small nuclear ribonucleoprotein F. | 0.869 |
RO3G_03199 | RO3G_12374 | I1BQL5 | I1CGT3 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D3. | 0.854 |
RO3G_03199 | RO3G_13510 | I1BQL5 | I1CK19 | Uncharacterized protein. | Uncharacterized protein. | 0.954 |
RO3G_03199 | RO3G_15318 | I1BQL5 | I1CQ77 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D2. | 0.867 |
RO3G_03431 | RO3G_03199 | I1BR96 | I1BQL5 | Uncharacterized protein. | Uncharacterized protein. | 0.979 |
RO3G_03431 | RO3G_03998 | I1BR96 | I1BSW3 | Uncharacterized protein. | Uncharacterized protein. | 0.677 |
RO3G_03431 | RO3G_15318 | I1BR96 | I1CQ77 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D2. | 0.974 |
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