Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RO3G_00463 | RO3G_03297 | I1BHS9 | I1BQW3 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. | MFS domain-containing protein. | 0.505 |
RO3G_00463 | RO3G_05255 | I1BHS9 | I1BWH0 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | 0.468 |
RO3G_00463 | RO3G_05836 | I1BHS9 | I1BY51 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.700 |
RO3G_00463 | RO3G_08033 | I1BHS9 | I1C4E8 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.700 |
RO3G_00463 | RO3G_13188 | I1BHS9 | I1CJ47 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.700 |
RO3G_00463 | RO3G_15197 | I1BHS9 | I1CPV6 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.700 |
RO3G_03297 | RO3G_00463 | I1BQW3 | I1BHS9 | MFS domain-containing protein. | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. | 0.505 |
RO3G_03297 | RO3G_05255 | I1BQW3 | I1BWH0 | MFS domain-containing protein. | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | 0.541 |
RO3G_03297 | RO3G_05836 | I1BQW3 | I1BY51 | MFS domain-containing protein. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.561 |
RO3G_03297 | RO3G_06292 | I1BQW3 | I1BZF7 | MFS domain-containing protein. | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. | 0.505 |
RO3G_03297 | RO3G_08033 | I1BQW3 | I1C4E8 | MFS domain-containing protein. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.561 |
RO3G_03297 | RO3G_08040 | I1BQW3 | I1C4F5 | MFS domain-containing protein. | Uncharacterized protein; Belongs to the cytochrome b5 family. | 0.608 |
RO3G_03297 | RO3G_11736 | I1BQW3 | I1CEZ5 | MFS domain-containing protein. | TPR_REGION domain-containing protein. | 0.505 |
RO3G_03297 | RO3G_13188 | I1BQW3 | I1CJ47 | MFS domain-containing protein. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.561 |
RO3G_03297 | RO3G_15197 | I1BQW3 | I1CPV6 | MFS domain-containing protein. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.561 |
RO3G_03297 | RO3G_15226 | I1BQW3 | I1CPY5 | MFS domain-containing protein. | Uncharacterized protein; Belongs to the cytochrome b5 family. | 0.608 |
RO3G_05255 | RO3G_00463 | I1BWH0 | I1BHS9 | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. | 0.468 |
RO3G_05255 | RO3G_03297 | I1BWH0 | I1BQW3 | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | MFS domain-containing protein. | 0.541 |
RO3G_05255 | RO3G_05836 | I1BWH0 | I1BY51 | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.452 |
RO3G_05255 | RO3G_06292 | I1BWH0 | I1BZF7 | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. | 0.468 |
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