STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_04725Uncharacterized protein. (106 aa)    
Predicted Functional Partners:
RO3G_02792
Uncharacterized protein.
    
 0.907
RO3G_03133
Uncharacterized protein.
    
 0.860
RO3G_12996
Ku domain-containing protein.
    
 0.760
RO3G_04884
Uncharacterized protein.
    
 0.742
RO3G_03715
DNA_LIGASE_A3 domain-containing protein; Belongs to the ATP-dependent DNA ligase family.
    
 0.730
RO3G_03716
BRCT domain-containing protein.
    
 0.730
RO3G_07348
DNA ligase.
    
 0.662
RO3G_00061
Protein kinase domain-containing protein.
    
 0.576
RO3G_05995
Serine/threonine-protein kinase pef1; Belongs to the protein kinase superfamily.
    
 0.576
RO3G_12482
Serine/threonine-protein kinase pef1; Belongs to the protein kinase superfamily.
    
 0.576
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.