STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_05195Phospho-2-dehydro-3-deoxyheptonate aldolase. (352 aa)    
Predicted Functional Partners:
RO3G_10201
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
   
 
 0.752
RO3G_00405
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 0.667
RO3G_09346
Uncharacterized protein.
   
  0.652
RO3G_01377
DHQ_synthase domain-containing protein.
   
 
 0.636
RO3G_02544
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
  0.607
RO3G_14093
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
  0.607
RO3G_09423
MRG domain-containing protein.
    
  0.592
RO3G_13678
MRG domain-containing protein.
    
  0.592
RO3G_04249
Phospho-2-dehydro-3-deoxyheptonate aldolase; Belongs to the class-II DAHP synthase family.
    
 0.571
RO3G_07765
Uncharacterized protein.
    
 0.571
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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