STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_05438Prenylcys_lyase domain-containing protein. (507 aa)    
Predicted Functional Partners:
RO3G_00666
Uncharacterized protein.
     
 0.680
RO3G_01841
Uncharacterized protein.
     
 0.680
RO3G_05375
Uncharacterized protein.
     
 0.680
RO3G_08491
Uncharacterized protein.
     
 0.680
RO3G_15757
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
      
 0.444
RO3G_11218
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
      
 0.443
RO3G_09037
UV excision repair protein Rad23.
      
 0.440
RO3G_08948
Agmatinase; Belongs to the arginase family.
      
 0.437
RO3G_09456
Aldedh domain-containing protein.
      
 0.435
RO3G_14022
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
      
 0.435
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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