STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_05508Helicase ATP-binding domain-containing protein. (291 aa)    
Predicted Functional Partners:
RO3G_05744
3'-5' exonuclease domain-containing protein.
    
 0.757
RO3G_00191
NADPH:adrenodoxin oxidoreductase, mitochondrial.
   
 
  0.742
RO3G_08314
Argininosuccinate lyase.
     
 0.695
RO3G_01677
Uncharacterized protein.
  
 
 0.692
RO3G_04865
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.692
RO3G_04352
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
  
0.689
RO3G_04645
Argininosuccinate synthase.
    
  0.677
RO3G_05446
Argininosuccinate synthase.
    
  0.677
RO3G_01089
Glutamine amidotransferase type-2 domain-containing protein.
   
 
  0.668
RO3G_16248
Glutamine amidotransferase type-2 domain-containing protein.
   
 
  0.668
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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