RO3G_05751 protein (Rhizopus delemar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RO3G_05751

cAMP-dependent protein kinase regulatory subunit. (381 aa)

Predicted Functional Partners:

RO3G_16474

0.937

RO3G_02400

0.922

RO3G_04575

0.920

RO3G_08206

0.920

RO3G_02050

0.918

RO3G_11680

0.916

RO3G_02632

0.913

RO3G_17007

0.906

RO3G_09740

0.893

RO3G_03866

0.883

Your Current Organism:

Rhizopus delemar

NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RO3G_02050	RO3G_05751	I1BMB6	I1BXW6	Uncharacterized protein; Belongs to the protein kinase superfamily.	cAMP-dependent protein kinase regulatory subunit.	0.918
RO3G_02400	RO3G_05751	I1BNB6	I1BXW6	Uncharacterized protein.	cAMP-dependent protein kinase regulatory subunit.	0.922
RO3G_02632	RO3G_05751	I1BNZ8	I1BXW6	Uncharacterized protein; Belongs to the protein kinase superfamily.	cAMP-dependent protein kinase regulatory subunit.	0.913
RO3G_03866	RO3G_05751	I1BSI1	I1BXW6	Uncharacterized protein; Belongs to the protein kinase superfamily.	cAMP-dependent protein kinase regulatory subunit.	0.883
RO3G_04575	RO3G_05751	I1BUJ0	I1BXW6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	cAMP-dependent protein kinase regulatory subunit.	0.920
RO3G_05751	RO3G_02050	I1BXW6	I1BMB6	cAMP-dependent protein kinase regulatory subunit.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.918
RO3G_05751	RO3G_02400	I1BXW6	I1BNB6	cAMP-dependent protein kinase regulatory subunit.	Uncharacterized protein.	0.922
RO3G_05751	RO3G_02632	I1BXW6	I1BNZ8	cAMP-dependent protein kinase regulatory subunit.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.913
RO3G_05751	RO3G_03866	I1BXW6	I1BSI1	cAMP-dependent protein kinase regulatory subunit.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.883
RO3G_05751	RO3G_04575	I1BXW6	I1BUJ0	cAMP-dependent protein kinase regulatory subunit.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.920
RO3G_05751	RO3G_08206	I1BXW6	I1C4X1	cAMP-dependent protein kinase regulatory subunit.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.920
RO3G_05751	RO3G_09740	I1BXW6	I1C9A0	cAMP-dependent protein kinase regulatory subunit.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.893
RO3G_05751	RO3G_11680	I1BXW6	I1CET9	cAMP-dependent protein kinase regulatory subunit.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.916
RO3G_05751	RO3G_16474	I1BXW6	I1CTI3	cAMP-dependent protein kinase regulatory subunit.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.937
RO3G_05751	RO3G_17007	I1BXW6	I1CVK5	cAMP-dependent protein kinase regulatory subunit.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.906
RO3G_08206	RO3G_05751	I1C4X1	I1BXW6	Uncharacterized protein; Belongs to the protein kinase superfamily.	cAMP-dependent protein kinase regulatory subunit.	0.920
RO3G_09740	RO3G_05751	I1C9A0	I1BXW6	Uncharacterized protein; Belongs to the protein kinase superfamily.	cAMP-dependent protein kinase regulatory subunit.	0.893
RO3G_11680	RO3G_05751	I1CET9	I1BXW6	Uncharacterized protein; Belongs to the protein kinase superfamily.	cAMP-dependent protein kinase regulatory subunit.	0.916
RO3G_16474	RO3G_05751	I1CTI3	I1BXW6	Uncharacterized protein; Belongs to the protein kinase superfamily.	cAMP-dependent protein kinase regulatory subunit.	0.937
RO3G_17007	RO3G_05751	I1CVK5	I1BXW6	Uncharacterized protein; Belongs to the protein kinase superfamily.	cAMP-dependent protein kinase regulatory subunit.	0.906