Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RO3G_02004 | RO3G_02259 | I1BM70 | I1BMX5 | Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. | Uncharacterized protein. | 0.908 |
RO3G_02004 | RO3G_03148 | I1BM70 | I1BQG4 | Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. | Uncharacterized protein. | 0.999 |
RO3G_02004 | RO3G_04248 | I1BM70 | I1BTL3 | Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. | zf-Tim10_DDP domain-containing protein. | 0.721 |
RO3G_02004 | RO3G_05792 | I1BM70 | I1BY07 | Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. | Uncharacterized protein. | 0.909 |
RO3G_02004 | RO3G_05977 | I1BM70 | I1BYJ2 | Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. | DDE_3 domain-containing protein. | 0.524 |
RO3G_02004 | RO3G_06810 | I1BM70 | I1C0X5 | Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. | zf-Tim10_DDP domain-containing protein. | 0.818 |
RO3G_02004 | RO3G_09030 | I1BM70 | I1C790 | Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. | DDE_3 domain-containing protein. | 0.524 |
RO3G_02004 | RO3G_14808 | I1BM70 | I1CNR7 | Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. | Mitochondrial import inner membrane translocase subunit TIM9. | 0.721 |
RO3G_02004 | RO3G_15322 | I1BM70 | I1CQ81 | Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. | zf-Tim10_DDP domain-containing protein. | 0.818 |
RO3G_02259 | RO3G_02004 | I1BMX5 | I1BM70 | Uncharacterized protein. | Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. | 0.908 |
RO3G_02259 | RO3G_03148 | I1BMX5 | I1BQG4 | Uncharacterized protein. | Uncharacterized protein. | 0.699 |
RO3G_02259 | RO3G_04248 | I1BMX5 | I1BTL3 | Uncharacterized protein. | zf-Tim10_DDP domain-containing protein. | 0.978 |
RO3G_02259 | RO3G_05559 | I1BMX5 | I1BXC4 | Uncharacterized protein. | Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. | 0.908 |
RO3G_02259 | RO3G_05977 | I1BMX5 | I1BYJ2 | Uncharacterized protein. | DDE_3 domain-containing protein. | 0.563 |
RO3G_02259 | RO3G_06810 | I1BMX5 | I1C0X5 | Uncharacterized protein. | zf-Tim10_DDP domain-containing protein. | 0.975 |
RO3G_02259 | RO3G_09030 | I1BMX5 | I1C790 | Uncharacterized protein. | DDE_3 domain-containing protein. | 0.563 |
RO3G_02259 | RO3G_14808 | I1BMX5 | I1CNR7 | Uncharacterized protein. | Mitochondrial import inner membrane translocase subunit TIM9. | 0.978 |
RO3G_02259 | RO3G_15322 | I1BMX5 | I1CQ81 | Uncharacterized protein. | zf-Tim10_DDP domain-containing protein. | 0.990 |
RO3G_03148 | RO3G_02004 | I1BQG4 | I1BM70 | Uncharacterized protein. | Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. | 0.999 |
RO3G_03148 | RO3G_02259 | I1BQG4 | I1BMX5 | Uncharacterized protein. | Uncharacterized protein. | 0.699 |
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