STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_06089Uncharacterized protein. (246 aa)    
Predicted Functional Partners:
RO3G_16278
Serine/threonine-protein phosphatase.
   
 0.999
RO3G_02565
Serine/threonine-protein phosphatase.
   
 0.984
RO3G_08858
Metallophos domain-containing protein.
   
 0.984
RO3G_03223
SMK-1 domain-containing protein.
   
 
 0.972
RO3G_03224
Uncharacterized protein.
   
 
 0.972
RO3G_14329
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 
 0.935
RO3G_04139
Serine/threonine-protein phosphatase.
    
 0.875
RO3G_04836
Serine/threonine-protein phosphatase 6 catalytic subunit.
    
 0.875
RO3G_00528
Serine/threonine-protein phosphatase.
    
 0.855
RO3G_14499
Serine/threonine-protein phosphatase.
    
 0.855
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.