Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLP1 | RO3G_04166 | I1BJG5 | I1BTD1 | mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. | CPSF_A domain-containing protein. | 0.951 |
CLP1 | RO3G_06933 | I1BJG5 | I1C198 | mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. | tRNA_int_end_N2 domain-containing protein. | 0.900 |
CLP1 | RO3G_08870 | I1BJG5 | I1C6T0 | mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. | Uncharacterized protein. | 0.985 |
RO3G_00516 | RO3G_06933 | I1BHY2 | I1C198 | Eukaryotic peptide chain release factor subunit 1. | tRNA_int_end_N2 domain-containing protein. | 0.513 |
RO3G_02327 | RO3G_06933 | I1BN43 | I1C198 | Methyltranfer_dom domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | tRNA_int_end_N2 domain-containing protein. | 0.813 |
RO3G_02655 | RO3G_06933 | I1BP21 | I1C198 | Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | tRNA_int_end_N2 domain-containing protein. | 0.813 |
RO3G_04166 | CLP1 | I1BTD1 | I1BJG5 | CPSF_A domain-containing protein. | mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. | 0.951 |
RO3G_04166 | RO3G_06933 | I1BTD1 | I1C198 | CPSF_A domain-containing protein. | tRNA_int_end_N2 domain-containing protein. | 0.746 |
RO3G_04166 | RO3G_08870 | I1BTD1 | I1C6T0 | CPSF_A domain-containing protein. | Uncharacterized protein. | 0.999 |
RO3G_04166 | RO3G_16531 | I1BTD1 | I1CTP0 | CPSF_A domain-containing protein. | DUF1775 domain-containing protein. | 0.910 |
RO3G_05501 | RO3G_06933 | I1BX66 | I1C198 | Eukaryotic peptide chain release factor subunit 1. | tRNA_int_end_N2 domain-containing protein. | 0.513 |
RO3G_06933 | CLP1 | I1C198 | I1BJG5 | tRNA_int_end_N2 domain-containing protein. | mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. | 0.900 |
RO3G_06933 | RO3G_00516 | I1C198 | I1BHY2 | tRNA_int_end_N2 domain-containing protein. | Eukaryotic peptide chain release factor subunit 1. | 0.513 |
RO3G_06933 | RO3G_02327 | I1C198 | I1BN43 | tRNA_int_end_N2 domain-containing protein. | Methyltranfer_dom domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.813 |
RO3G_06933 | RO3G_02655 | I1C198 | I1BP21 | tRNA_int_end_N2 domain-containing protein. | Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.813 |
RO3G_06933 | RO3G_04166 | I1C198 | I1BTD1 | tRNA_int_end_N2 domain-containing protein. | CPSF_A domain-containing protein. | 0.746 |
RO3G_06933 | RO3G_05501 | I1C198 | I1BX66 | tRNA_int_end_N2 domain-containing protein. | Eukaryotic peptide chain release factor subunit 1. | 0.513 |
RO3G_06933 | RO3G_08027 | I1C198 | I1C4E2 | tRNA_int_end_N2 domain-containing protein. | AMMECR1 domain-containing protein. | 0.511 |
RO3G_06933 | RO3G_08870 | I1C198 | I1C6T0 | tRNA_int_end_N2 domain-containing protein. | Uncharacterized protein. | 0.661 |
RO3G_06933 | RO3G_11258 | I1C198 | I1CDL7 | tRNA_int_end_N2 domain-containing protein. | Uncharacterized protein. | 0.504 |
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