STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_07379WD_REPEATS_REGION domain-containing protein. (449 aa)    
Predicted Functional Partners:
RO3G_00892
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.999
RO3G_04166
CPSF_A domain-containing protein.
    
 0.999
RO3G_08870
Uncharacterized protein.
   
 0.999
RO3G_14511
Uncharacterized protein.
   
 0.999
RO3G_15007
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
   
 0.999
RO3G_15543
DUF3453 domain-containing protein.
    
 0.999
RO3G_12479
Uncharacterized protein.
   
 0.997
RO3G_12820
WD_REPEATS_REGION domain-containing protein.
  
 0.997
RO3G_03955
Uncharacterized protein.
    
 0.994
RO3G_11736
TPR_REGION domain-containing protein.
   
 0.994
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.