Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RO3G_00405 | RO3G_00430 | I1BHM1 | I1BHP6 | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | Ubiquitin-like domain-containing protein. | 0.587 |
RO3G_00405 | RO3G_04464 | I1BHM1 | I1BU79 | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | Uncharacterized protein. | 0.488 |
RO3G_00405 | RO3G_05551 | I1BHM1 | I1BXB6 | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | Ubiquitin-60S ribosomal protein L40. | 0.488 |
RO3G_00405 | RO3G_05698 | I1BHM1 | I1BXR3 | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | WD_REPEATS_REGION domain-containing protein. | 0.783 |
RO3G_00405 | RO3G_05994 | I1BHM1 | I1BYK9 | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | Uncharacterized protein. | 0.511 |
RO3G_00405 | RO3G_06177 | I1BHM1 | I1BZ42 | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | Ubiquitin-like domain-containing protein. | 0.587 |
RO3G_00405 | RO3G_07425 | I1BHM1 | I1C2P0 | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | Uncharacterized protein. | 0.815 |
RO3G_00405 | RO3G_10092 | I1BHM1 | I1CAA2 | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | Ubiquitin-like domain-containing protein. | 0.587 |
RO3G_00405 | RO3G_15350 | I1BHM1 | I1CQA9 | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | Ubiquitin-like domain-containing protein. | 0.587 |
RO3G_00430 | RO3G_00405 | I1BHP6 | I1BHM1 | Ubiquitin-like domain-containing protein. | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | 0.587 |
RO3G_00430 | RO3G_04464 | I1BHP6 | I1BU79 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.988 |
RO3G_00430 | RO3G_05551 | I1BHP6 | I1BXB6 | Ubiquitin-like domain-containing protein. | Ubiquitin-60S ribosomal protein L40. | 0.989 |
RO3G_00430 | RO3G_05698 | I1BHP6 | I1BXR3 | Ubiquitin-like domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.651 |
RO3G_00430 | RO3G_05994 | I1BHP6 | I1BYK9 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.989 |
RO3G_00430 | RO3G_07425 | I1BHP6 | I1C2P0 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.638 |
RO3G_00921 | RO3G_07425 | I1BJ37 | I1C2P0 | POT1PC domain-containing protein. | Uncharacterized protein. | 0.637 |
RO3G_04464 | RO3G_00405 | I1BU79 | I1BHM1 | Uncharacterized protein. | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | 0.488 |
RO3G_04464 | RO3G_00430 | I1BU79 | I1BHP6 | Uncharacterized protein. | Ubiquitin-like domain-containing protein. | 0.988 |
RO3G_04464 | RO3G_05698 | I1BU79 | I1BXR3 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.749 |
RO3G_04464 | RO3G_05994 | I1BU79 | I1BYK9 | Uncharacterized protein. | Uncharacterized protein. | 0.988 |
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