Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERB1 | RO3G_01501 | I1BGH2 | I1BKR7 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.997 |
ERB1 | RO3G_03198 | I1BGH2 | I1BQL4 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | C2H2-type domain-containing protein. | 0.627 |
ERB1 | RO3G_03915 | I1BGH2 | I1C1M6 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.946 |
ERB1 | RO3G_04494 | I1BGH2 | I1BUA9 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 60S ribosomal protein L23; Belongs to the universal ribosomal protein uL23 family. | 0.927 |
ERB1 | RO3G_06651 | I1BGH2 | I1C0G6 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.988 |
ERB1 | RO3G_08088 | I1BGH2 | I1C4K3 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | RRM domain-containing protein. | 0.987 |
ERB1 | RO3G_08192 | I1BGH2 | I1C4V7 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.997 |
ERB1 | RO3G_08889 | I1BGH2 | I1C6U9 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.997 |
ERB1 | RO3G_16290 | I1BGH2 | I1CSZ9 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | WD_REPEATS_REGION domain-containing protein. | 0.998 |
RO3G_01501 | ERB1 | I1BKR7 | I1BGH2 | Uncharacterized protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.997 |
RO3G_01501 | RO3G_03198 | I1BKR7 | I1BQL4 | Uncharacterized protein. | C2H2-type domain-containing protein. | 0.956 |
RO3G_01501 | RO3G_03915 | I1BKR7 | I1C1M6 | Uncharacterized protein. | Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.947 |
RO3G_01501 | RO3G_04494 | I1BKR7 | I1BUA9 | Uncharacterized protein. | 60S ribosomal protein L23; Belongs to the universal ribosomal protein uL23 family. | 0.951 |
RO3G_01501 | RO3G_06001 | I1BKR7 | I1BYL6 | Uncharacterized protein. | Uncharacterized protein. | 0.997 |
RO3G_01501 | RO3G_06651 | I1BKR7 | I1C0G6 | Uncharacterized protein. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.997 |
RO3G_01501 | RO3G_08088 | I1BKR7 | I1C4K3 | Uncharacterized protein. | RRM domain-containing protein. | 0.995 |
RO3G_01501 | RO3G_08192 | I1BKR7 | I1C4V7 | Uncharacterized protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.997 |
RO3G_01501 | RO3G_08889 | I1BKR7 | I1C6U9 | Uncharacterized protein. | Uncharacterized protein. | 0.991 |
RO3G_01501 | RO3G_16290 | I1BKR7 | I1CSZ9 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.998 |
RO3G_03198 | ERB1 | I1BQL4 | I1BGH2 | C2H2-type domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.627 |
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