STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_09019XPGI domain-containing protein. (816 aa)    
Predicted Functional Partners:
RO3G_05744
3'-5' exonuclease domain-containing protein.
  
 0.999
RO3G_12223
Uncharacterized protein.
    
 0.998
RO3G_09652
Uncharacterized protein.
   
 0.995
RO3G_12924
BSD domain-containing protein.
    
 0.994
RO3G_12052
Helicase ATP-binding domain-containing protein.
    
 0.988
RO3G_08189
XPA_C domain-containing protein.
    
 0.984
RO3G_15931
Uncharacterized protein.
   
 0.983
RO3G_04340
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
    
 0.981
RO3G_07842
Uncharacterized protein.
   
 0.978
RO3G_11820
Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family.
   
 0.946
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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