Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RO3G_00072 | RO3G_04536 | I1BGN8 | I1BUF1 | Brix domain-containing protein. | Uncharacterized protein. | 0.977 |
RO3G_00072 | RO3G_05540 | I1BGN8 | I1BXA5 | Brix domain-containing protein. | Uncharacterized protein. | 0.996 |
RO3G_00072 | RO3G_06710 | I1BGN8 | I1C0M5 | Brix domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.991 |
RO3G_00072 | RO3G_08088 | I1BGN8 | I1C4K3 | Brix domain-containing protein. | RRM domain-containing protein. | 0.996 |
RO3G_00072 | RO3G_09462 | I1BGN8 | I1C8H2 | Brix domain-containing protein. | PUM-HD domain-containing protein. | 0.987 |
RO3G_00072 | RO3G_10603 | I1BGN8 | I1CBR3 | Brix domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.991 |
RO3G_00072 | RO3G_11821 | I1BGN8 | I1CF80 | Brix domain-containing protein. | Brix domain-containing protein. | 0.984 |
RO3G_00072 | RO3G_14023 | I1BGN8 | I1CLI2 | Brix domain-containing protein. | Uncharacterized protein. | 0.851 |
RO3G_00072 | RO3G_15432 | I1BGN8 | I1CQJ1 | Brix domain-containing protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.994 |
RO3G_04536 | RO3G_00072 | I1BUF1 | I1BGN8 | Uncharacterized protein. | Brix domain-containing protein. | 0.977 |
RO3G_04536 | RO3G_05540 | I1BUF1 | I1BXA5 | Uncharacterized protein. | Uncharacterized protein. | 0.978 |
RO3G_04536 | RO3G_06140 | I1BUF1 | I1BZ05 | Uncharacterized protein. | Brix domain-containing protein. | 0.977 |
RO3G_04536 | RO3G_06710 | I1BUF1 | I1C0M5 | Uncharacterized protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.987 |
RO3G_04536 | RO3G_08088 | I1BUF1 | I1C4K3 | Uncharacterized protein. | RRM domain-containing protein. | 0.996 |
RO3G_04536 | RO3G_09462 | I1BUF1 | I1C8H2 | Uncharacterized protein. | PUM-HD domain-containing protein. | 0.994 |
RO3G_04536 | RO3G_10603 | I1BUF1 | I1CBR3 | Uncharacterized protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.987 |
RO3G_04536 | RO3G_11821 | I1BUF1 | I1CF80 | Uncharacterized protein. | Brix domain-containing protein. | 0.977 |
RO3G_04536 | RO3G_14023 | I1BUF1 | I1CLI2 | Uncharacterized protein. | Uncharacterized protein. | 0.995 |
RO3G_04536 | RO3G_15432 | I1BUF1 | I1CQJ1 | Uncharacterized protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.995 |
RO3G_05540 | RO3G_00072 | I1BXA5 | I1BGN8 | Uncharacterized protein. | Brix domain-containing protein. | 0.996 |
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