STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_10380Gluconokinase; Belongs to the gluconokinase GntK/GntV family. (193 aa)    
Predicted Functional Partners:
RO3G_00354
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
   
 0.877
RO3G_02097
Dihydroxy-acid dehydratase.
  
 
 0.858
RO3G_08366
Dihydroxy-acid dehydratase.
  
 
 0.858
RO3G_08745
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
     
 0.851
RO3G_02257
Uncharacterized protein.
     
 0.850
RO3G_02406
Glucosamine-6-phosphate isomerase.
   
 0.836
RO3G_05173
Glucosamine-6-phosphate isomerase 1.
   
 0.836
RO3G_07378
Glucosamine-6-phosphate isomerase.
   
 0.836
RO3G_14291
Glucosamine-6-phosphate isomerase.
   
 0.836
RO3G_01672
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
 0.830
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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