STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_11170Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family. (121 aa)    
Predicted Functional Partners:
RO3G_05545
Uncharacterized protein.
   
 
 0.989
RO3G_08306
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
   0.974
RO3G_05833
Uncharacterized protein.
   
 
 0.970
RO3G_01143
RNase III domain-containing protein.
   
 
 0.967
RO3G_02033
L51_S25_CI-B8 domain-containing protein.
   
 
 0.963
RO3G_15550
Uncharacterized protein.
   
 
 0.962
RO3G_07398
Ribosomal_L18e/L15P domain-containing protein.
   
 
 0.959
RO3G_15972
Ribosomal_L2_C domain-containing protein.
   
 
 0.958
RO3G_05296
Uncharacterized protein.
   
 
 0.957
RO3G_05688
Uncharacterized protein.
   
 
 0.956
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.