Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RO3G_00927 | RO3G_02575 | I1BJ43 | I1BNU1 | Tyrosine--tRNA ligase. | Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration. | 0.497 |
RO3G_00927 | RO3G_11754 | I1BJ43 | I1CF13 | Tyrosine--tRNA ligase. | RING-type domain-containing protein. | 0.439 |
RO3G_02575 | RO3G_00927 | I1BNU1 | I1BJ43 | Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration. | Tyrosine--tRNA ligase. | 0.497 |
RO3G_02575 | RO3G_11754 | I1BNU1 | I1CF13 | Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration. | RING-type domain-containing protein. | 0.408 |
RO3G_03819 | RO3G_11754 | I1BSD4 | I1CF13 | Uncharacterized protein; Belongs to the peptidase M16 family. | RING-type domain-containing protein. | 0.438 |
RO3G_06957 | RO3G_08151 | I1C1C2 | I1C4R6 | Uncharacterized protein. | CIA30 domain-containing protein. | 0.979 |
RO3G_06957 | RO3G_11754 | I1C1C2 | I1CF13 | Uncharacterized protein. | RING-type domain-containing protein. | 0.415 |
RO3G_08151 | RO3G_06957 | I1C4R6 | I1C1C2 | CIA30 domain-containing protein. | Uncharacterized protein. | 0.979 |
RO3G_08151 | RO3G_11754 | I1C4R6 | I1CF13 | CIA30 domain-containing protein. | RING-type domain-containing protein. | 0.411 |
RO3G_08151 | RO3G_12817 | I1C4R6 | I1CI26 | CIA30 domain-containing protein. | Cytochrome b5 heme-binding domain-containing protein. | 0.997 |
RO3G_11754 | RO3G_00927 | I1CF13 | I1BJ43 | RING-type domain-containing protein. | Tyrosine--tRNA ligase. | 0.439 |
RO3G_11754 | RO3G_02575 | I1CF13 | I1BNU1 | RING-type domain-containing protein. | Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration. | 0.408 |
RO3G_11754 | RO3G_03819 | I1CF13 | I1BSD4 | RING-type domain-containing protein. | Uncharacterized protein; Belongs to the peptidase M16 family. | 0.438 |
RO3G_11754 | RO3G_06957 | I1CF13 | I1C1C2 | RING-type domain-containing protein. | Uncharacterized protein. | 0.415 |
RO3G_11754 | RO3G_08151 | I1CF13 | I1C4R6 | RING-type domain-containing protein. | CIA30 domain-containing protein. | 0.411 |
RO3G_11754 | RO3G_12817 | I1CF13 | I1CI26 | RING-type domain-containing protein. | Cytochrome b5 heme-binding domain-containing protein. | 0.499 |
RO3G_12817 | RO3G_08151 | I1CI26 | I1C4R6 | Cytochrome b5 heme-binding domain-containing protein. | CIA30 domain-containing protein. | 0.997 |
RO3G_12817 | RO3G_11754 | I1CI26 | I1CF13 | Cytochrome b5 heme-binding domain-containing protein. | RING-type domain-containing protein. | 0.499 |