STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_12237Uncharacterized protein; Belongs to the peptidase S8 family. (848 aa)    
Predicted Functional Partners:
RO3G_05744
3'-5' exonuclease domain-containing protein.
    
 0.826
RO3G_00921
POT1PC domain-containing protein.
    
 0.817
RO3G_14658
Erf4 domain-containing protein.
    
 0.809
RO3G_14378
Zinc-hook domain-containing protein.
    
 0.725
RO3G_11820
Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family.
    
  0.708
RO3G_02478
Uncharacterized protein.
     
 0.648
RO3G_10810
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 0.538
RO3G_10811
Uncharacterized protein.
    
 0.538
RO3G_06159
H/ACA ribonucleoprotein complex subunit 4.
    
 0.532
RO3G_09003
tRNA pseudouridine synthase B.
    
 0.532
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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