Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RO3G_00921 | RO3G_05744 | I1BJ37 | I1BXV9 | POT1PC domain-containing protein. | 3'-5' exonuclease domain-containing protein. | 0.993 |
RO3G_00921 | RO3G_06159 | I1BJ37 | I1BZ24 | POT1PC domain-containing protein. | H/ACA ribonucleoprotein complex subunit 4. | 0.743 |
RO3G_00921 | RO3G_09003 | I1BJ37 | I1C763 | POT1PC domain-containing protein. | tRNA pseudouridine synthase B. | 0.743 |
RO3G_00921 | RO3G_10810 | I1BJ37 | I1CCB9 | POT1PC domain-containing protein. | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 0.976 |
RO3G_00921 | RO3G_10811 | I1BJ37 | I1CCC0 | POT1PC domain-containing protein. | Uncharacterized protein. | 0.976 |
RO3G_00921 | RO3G_11820 | I1BJ37 | I1CF79 | POT1PC domain-containing protein. | Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family. | 0.709 |
RO3G_00921 | RO3G_12237 | I1BJ37 | I1CGE6 | POT1PC domain-containing protein. | Uncharacterized protein; Belongs to the peptidase S8 family. | 0.817 |
RO3G_00921 | RO3G_14378 | I1BJ37 | I1CMI7 | POT1PC domain-containing protein. | Zinc-hook domain-containing protein. | 0.685 |
RO3G_02478 | RO3G_12237 | I1BNJ4 | I1CGE6 | Uncharacterized protein. | Uncharacterized protein; Belongs to the peptidase S8 family. | 0.648 |
RO3G_05744 | RO3G_00921 | I1BXV9 | I1BJ37 | 3'-5' exonuclease domain-containing protein. | POT1PC domain-containing protein. | 0.993 |
RO3G_05744 | RO3G_06159 | I1BXV9 | I1BZ24 | 3'-5' exonuclease domain-containing protein. | H/ACA ribonucleoprotein complex subunit 4. | 0.462 |
RO3G_05744 | RO3G_09003 | I1BXV9 | I1C763 | 3'-5' exonuclease domain-containing protein. | tRNA pseudouridine synthase B. | 0.462 |
RO3G_05744 | RO3G_10810 | I1BXV9 | I1CCB9 | 3'-5' exonuclease domain-containing protein. | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 0.722 |
RO3G_05744 | RO3G_10811 | I1BXV9 | I1CCC0 | 3'-5' exonuclease domain-containing protein. | Uncharacterized protein. | 0.722 |
RO3G_05744 | RO3G_11820 | I1BXV9 | I1CF79 | 3'-5' exonuclease domain-containing protein. | Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family. | 0.999 |
RO3G_05744 | RO3G_12237 | I1BXV9 | I1CGE6 | 3'-5' exonuclease domain-containing protein. | Uncharacterized protein; Belongs to the peptidase S8 family. | 0.826 |
RO3G_05744 | RO3G_14378 | I1BXV9 | I1CMI7 | 3'-5' exonuclease domain-containing protein. | Zinc-hook domain-containing protein. | 0.997 |
RO3G_06159 | RO3G_00921 | I1BZ24 | I1BJ37 | H/ACA ribonucleoprotein complex subunit 4. | POT1PC domain-containing protein. | 0.743 |
RO3G_06159 | RO3G_05744 | I1BZ24 | I1BXV9 | H/ACA ribonucleoprotein complex subunit 4. | 3'-5' exonuclease domain-containing protein. | 0.462 |
RO3G_06159 | RO3G_09003 | I1BZ24 | I1C763 | H/ACA ribonucleoprotein complex subunit 4. | tRNA pseudouridine synthase B. | 0.418 |
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