STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_12761Uncharacterized protein. (570 aa)    
Predicted Functional Partners:
RO3G_02792
Uncharacterized protein.
    
  0.700
RO3G_03133
Uncharacterized protein.
    
  0.680
RO3G_16040
Uncharacterized protein.
    
  0.667
RO3G_00009
60S ribosomal protein L21-A.
   
   0.655
RO3G_08159
60S ribosomal protein L21-A.
   
   0.655
RO3G_15972
Ribosomal_L2_C domain-containing protein.
   
 
 0.638
RO3G_11820
Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family.
    
  0.609
RO3G_04464
Uncharacterized protein.
    
  0.597
RO3G_05551
Ubiquitin-60S ribosomal protein L40.
    
  0.597
RO3G_02674
60S ribosomal protein L2.
   
 
 0.597
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.