STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_12875Uncharacterized protein. (1135 aa)    
Predicted Functional Partners:
RO3G_04352
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.994
RO3G_14004
Uncharacterized protein.
    
 
 0.992
RO3G_05744
3'-5' exonuclease domain-containing protein.
  
 0.990
RO3G_16224
RECA_2 domain-containing protein.
  
 
 0.969
RO3G_06321
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
  
 
 0.967
RO3G_10066
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
  
 
 0.967
RO3G_02544
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 
 0.960
RO3G_04344
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
  
 
 0.960
RO3G_14093
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 
 0.960
RO3G_02509
Uncharacterized protein.
   
 
 0.956
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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