STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_13265Uncharacterized protein. (640 aa)    
Predicted Functional Partners:
RO3G_03431
Uncharacterized protein.
    
 0.832
RO3G_03544
Uncharacterized protein.
    
 0.804
RO3G_03237
RNA_pol_L_2 domain-containing protein.
    
  0.762
RO3G_08229
TFIIS-type domain-containing protein.
    
  0.757
RO3G_09698
Uncharacterized protein.
    
  0.757
RO3G_13831
RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein.
    
  0.756
RO3G_11863
RPOL4c domain-containing protein.
    
  0.740
RO3G_03742
SHS2_Rpb7-N domain-containing protein.
    
  0.730
RO3G_03440
Uncharacterized protein.
    
 0.724
RO3G_14001
B30.2/SPRY domain-containing protein.
    
 0.722
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.