Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RO3G_00394 | RO3G_00920 | I1BHL0 | I1BJ36 | Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. | SE domain-containing protein. | 0.532 |
RO3G_00394 | RO3G_02215 | I1BHL0 | I1BMT1 | Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. | Uncharacterized protein. | 0.532 |
RO3G_00394 | RO3G_11081 | I1BHL0 | I1CD40 | Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. | SE domain-containing protein. | 0.532 |
RO3G_00394 | RO3G_11218 | I1BHL0 | I1CDH7 | Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. | Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family. | 0.989 |
RO3G_00394 | RO3G_13071 | I1BHL0 | I1CIT0 | Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.913 |
RO3G_00394 | RO3G_14184 | I1BHL0 | I1CLZ3 | Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. | 3-hydroxy-3-methylglutaryl coenzyme A reductase. | 0.890 |
RO3G_00920 | RO3G_00394 | I1BJ36 | I1BHL0 | SE domain-containing protein. | Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. | 0.532 |
RO3G_00920 | RO3G_11218 | I1BJ36 | I1CDH7 | SE domain-containing protein. | Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family. | 0.637 |
RO3G_00920 | RO3G_13071 | I1BJ36 | I1CIT0 | SE domain-containing protein. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.938 |
RO3G_00920 | RO3G_14184 | I1BJ36 | I1CLZ3 | SE domain-containing protein. | 3-hydroxy-3-methylglutaryl coenzyme A reductase. | 0.767 |
RO3G_02215 | RO3G_00394 | I1BMT1 | I1BHL0 | Uncharacterized protein. | Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. | 0.532 |
RO3G_02215 | RO3G_11218 | I1BMT1 | I1CDH7 | Uncharacterized protein. | Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family. | 0.637 |
RO3G_02215 | RO3G_13071 | I1BMT1 | I1CIT0 | Uncharacterized protein. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.938 |
RO3G_02215 | RO3G_14184 | I1BMT1 | I1CLZ3 | Uncharacterized protein. | 3-hydroxy-3-methylglutaryl coenzyme A reductase. | 0.767 |
RO3G_02884 | RO3G_14184 | I1BPQ0 | I1CLZ3 | Uncharacterized protein. | 3-hydroxy-3-methylglutaryl coenzyme A reductase. | 0.803 |
RO3G_04399 | RO3G_06702 | I1BU14 | I1C0L7 | Uncharacterized protein. | Uncharacterized protein. | 0.632 |
RO3G_04399 | RO3G_14184 | I1BU14 | I1CLZ3 | Uncharacterized protein. | 3-hydroxy-3-methylglutaryl coenzyme A reductase. | 0.807 |
RO3G_06702 | RO3G_04399 | I1C0L7 | I1BU14 | Uncharacterized protein. | Uncharacterized protein. | 0.632 |
RO3G_06702 | RO3G_13071 | I1C0L7 | I1CIT0 | Uncharacterized protein. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.481 |
RO3G_06702 | RO3G_14184 | I1C0L7 | I1CLZ3 | Uncharacterized protein. | 3-hydroxy-3-methylglutaryl coenzyme A reductase. | 0.912 |
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