STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_15840Uncharacterized protein. (2974 aa)    
Predicted Functional Partners:
RO3G_10946
Uncharacterized protein.
    
 
 0.701
RO3G_11124
DUF1691 domain-containing protein.
    
 
 0.698
RO3G_00733
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.682
RO3G_03928
Uncharacterized protein.
    
 
 0.681
RO3G_02905
Uncharacterized protein.
    
 
 0.647
RO3G_11377
SAC domain-containing protein.
    
 
 0.640
RO3G_05867
Uncharacterized protein.
    
 
 0.613
RO3G_14917
AAA domain-containing protein.
    
   0.532
RO3G_02426
Uncharacterized protein.
   
 
 0.523
RO3G_16680
SMP-LTD domain-containing protein.
    
   0.517
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.