STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_16130Uncharacterized protein. (430 aa)    
Predicted Functional Partners:
RO3G_14004
Uncharacterized protein.
    
  0.883
RO3G_16104
Uncharacterized protein.
    
  0.664
RO3G_08280
Uncharacterized protein.
    
  0.618
RO3G_11581
Uncharacterized protein.
    
  0.576
RO3G_09757
Uncharacterized protein.
    
  0.534
RO3G_12935
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.534
RO3G_01472
G protein gamma domain-containing protein.
    
  0.498
RO3G_04471
Uncharacterized protein.
    
  0.485
RO3G_14063
Uncharacterized protein.
    
  0.485
RO3G_16769
dUTPase domain-containing protein.
    
  0.485
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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