STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_16180UBA domain-containing protein. (727 aa)    
Predicted Functional Partners:
RO3G_10712
Uncharacterized protein.
    
 0.999
RO3G_07472
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.997
RO3G_01814
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.963
RO3G_07752
Uncharacterized protein.
    
 0.952
RO3G_07772
Uncharacterized protein.
    
 0.952
RO3G_06488
Uncharacterized protein.
  
 0.943
RO3G_07525
Uncharacterized protein.
  
 0.943
RO3G_08670
Heat shock 70 kDa protein; Belongs to the heat shock protein 70 family.
  
 0.935
RO3G_11764
Heat shock 70 kDa protein.
  
 0.935
RO3G_04456
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
   
 0.926
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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