STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO3G_17082Uncharacterized protein; Belongs to the VPS28 family. (150 aa)    
Predicted Functional Partners:
RO3G_04537
UEV domain-containing protein.
   
 0.999
RO3G_16461
Uncharacterized protein.
   
 0.996
RO3G_07387
Uncharacterized protein.
   
 0.974
RO3G_15425
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
    
   0.967
RO3G_14922
Uncharacterized protein.
   
 0.932
RO3G_12515
Uncharacterized protein.
   
 0.906
RO3G_10883
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
    
 0.867
RO3G_15686
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
    
 0.867
RO3G_14278
FYVE-type domain-containing protein.
    
 0.858
RO3G_12425
Uncharacterized protein.
   
 
 0.836
Your Current Organism:
Rhizopus delemar
NCBI taxonomy Id: 246409
Other names: R. delemar RA 99-880, Rhizopus delemar RA 99-880, Rhizopus delemar RA99-880
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