Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RO3G_00344 | RO3G_00985 | I1BHG0 | I1BJA1 | Uncharacterized protein. | MUTSd domain-containing protein. | 0.862 |
RO3G_00344 | RO3G_00986 | I1BHG0 | I1BJA2 | Uncharacterized protein. | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.862 |
RO3G_00344 | RO3G_01839 | I1BHG0 | I1BLQ5 | Uncharacterized protein. | Uncharacterized protein. | 0.864 |
RO3G_00344 | RO3G_06462 | I1BHG0 | I1BZX7 | Uncharacterized protein. | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.865 |
RO3G_00344 | RO3G_08797 | I1BHG0 | I1C6L2 | Uncharacterized protein. | Uncharacterized protein. | 0.982 |
RO3G_00344 | RO3G_08798 | I1BHG0 | I1C6L3 | Uncharacterized protein. | Mlh1_C domain-containing protein. | 0.982 |
RO3G_00344 | RO3G_11160 | I1BHG0 | I1CDB9 | Uncharacterized protein. | DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.997 |
RO3G_00344 | RO3G_15768 | I1BHG0 | I1CRH7 | Uncharacterized protein. | DNA mismatch repair protein MutS. | 0.989 |
RO3G_00344 | RO3G_16015 | I1BHG0 | I1CS74 | Uncharacterized protein. | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.997 |
RO3G_00344 | RO3G_17426 | I1BHG0 | I1CW84 | Uncharacterized protein. | Uncharacterized protein. | 0.781 |
RO3G_00985 | RO3G_00344 | I1BJA1 | I1BHG0 | MUTSd domain-containing protein. | Uncharacterized protein. | 0.862 |
RO3G_00985 | RO3G_00986 | I1BJA1 | I1BJA2 | MUTSd domain-containing protein. | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.674 |
RO3G_00985 | RO3G_01839 | I1BJA1 | I1BLQ5 | MUTSd domain-containing protein. | Uncharacterized protein. | 0.991 |
RO3G_00985 | RO3G_08797 | I1BJA1 | I1C6L2 | MUTSd domain-containing protein. | Uncharacterized protein. | 0.825 |
RO3G_00985 | RO3G_08798 | I1BJA1 | I1C6L3 | MUTSd domain-containing protein. | Mlh1_C domain-containing protein. | 0.825 |
RO3G_00985 | RO3G_11160 | I1BJA1 | I1CDB9 | MUTSd domain-containing protein. | DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.410 |
RO3G_00985 | RO3G_15768 | I1BJA1 | I1CRH7 | MUTSd domain-containing protein. | DNA mismatch repair protein MutS. | 0.480 |
RO3G_00985 | RO3G_16015 | I1BJA1 | I1CS74 | MUTSd domain-containing protein. | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.483 |
RO3G_00985 | RO3G_17426 | I1BJA1 | I1CW84 | MUTSd domain-containing protein. | Uncharacterized protein. | 0.779 |
RO3G_00986 | RO3G_00344 | I1BJA2 | I1BHG0 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | Uncharacterized protein. | 0.862 |
page 1 of 6