STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIMG09298Nuclear pore complex subunit. (1664 aa)    
Predicted Functional Partners:
CIMG_08170
Non-repetitive nucleoporin.
   
 0.999
CIMG_08519
Nuclear pore protein.
   
 0.999
CIMG_08982
Nucleoporin.
   
 0.998
CIMG_04535
Nuclear pore complex protein Nup62.
   
 0.998
CIMG_06924
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.996
CIMG_08207
Nuclear pore protein; Belongs to the WD repeat SEC13 family.
   
 0.994
CIMG_01071
Nuclear pore complex subunit.
   
 0.994
CIMG_07222
Nuclear pore complex protein Nup133.
   
 0.992
SEC13
Protein transport protein SEC13; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport facto [...]
    
 0.984
CIMG_01511
Nucleoporin SONB.
   
 0.981
Your Current Organism:
Coccidioides immitis RS
NCBI taxonomy Id: 246410
Other names: C. immitis RS
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