Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CIMG07687 | CIMG_02263 | A0A0D8JU84 | J3KKZ6 | Uncharacterized protein. | Small GTP-binding protein. | 0.454 |
CIMG07687 | CIMG_03364 | A0A0D8JU84 | J3KB69 | Uncharacterized protein. | Diphthine synthase. | 0.617 |
CIMG07687 | CIMG_05034 | A0A0D8JU84 | A0A0E1RXE9 | Uncharacterized protein. | Elongation factor 2. | 0.846 |
CIMG07687 | CIMG_07995 | A0A0D8JU84 | J3K4K0 | Uncharacterized protein. | Uncharacterized protein. | 0.408 |
CIMG07687 | CIMG_07996 | A0A0D8JU84 | J3K4K1 | Uncharacterized protein. | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2; Belongs to the DPH1/DPH2 family. DPH2 subfamily. | 0.408 |
CIMG07687 | CIMG_08216 | A0A0D8JU84 | A0A0E1RV95 | Uncharacterized protein. | ATP binding L-PSP endoribonuclease. | 0.624 |
CIMG07687 | CIMG_09353 | A0A0D8JU84 | J3K259 | Uncharacterized protein. | Small GTP-binding protein. | 0.443 |
CIMG07687 | MEF1 | A0A0D8JU84 | Q1DLM0 | Uncharacterized protein. | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. | 0.443 |
CIMG07687 | MEF2 | A0A0D8JU84 | J3K7D3 | Uncharacterized protein. | Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.443 |
CIMG_02263 | CIMG07687 | J3KKZ6 | A0A0D8JU84 | Small GTP-binding protein. | Uncharacterized protein. | 0.454 |
CIMG_02263 | CIMG_03364 | J3KKZ6 | J3KB69 | Small GTP-binding protein. | Diphthine synthase. | 0.585 |
CIMG_02263 | CIMG_07995 | J3KKZ6 | J3K4K0 | Small GTP-binding protein. | Uncharacterized protein. | 0.573 |
CIMG_02263 | CIMG_07996 | J3KKZ6 | J3K4K1 | Small GTP-binding protein. | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2; Belongs to the DPH1/DPH2 family. DPH2 subfamily. | 0.573 |
CIMG_02263 | CIMG_08216 | J3KKZ6 | A0A0E1RV95 | Small GTP-binding protein. | ATP binding L-PSP endoribonuclease. | 0.971 |
CIMG_02263 | CIMG_09582 | J3KKZ6 | A0A0D8JW98 | Small GTP-binding protein. | GMP synthase [glutamine-hydrolyzing]. | 0.424 |
CIMG_03364 | CIMG07687 | J3KB69 | A0A0D8JU84 | Diphthine synthase. | Uncharacterized protein. | 0.617 |
CIMG_03364 | CIMG_02263 | J3KB69 | J3KKZ6 | Diphthine synthase. | Small GTP-binding protein. | 0.585 |
CIMG_03364 | CIMG_05034 | J3KB69 | A0A0E1RXE9 | Diphthine synthase. | Elongation factor 2. | 0.986 |
CIMG_03364 | CIMG_07995 | J3KB69 | J3K4K0 | Diphthine synthase. | Uncharacterized protein. | 0.713 |
CIMG_03364 | CIMG_07996 | J3KB69 | J3K4K1 | Diphthine synthase. | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2; Belongs to the DPH1/DPH2 family. DPH2 subfamily. | 0.742 |
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