STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIMG_00859Polyadenylation factor subunit 2. (572 aa)    
Predicted Functional Partners:
CIMG_09672
Pre-mRNA polyadenylation factor fip1.
   
 0.999
CIMG_03003
Endoribonuclease ysh1.
   
 0.999
CIMG_04751
mRNA 3'-end-processing protein yth1.
   
 0.999
CIMG_02207
mRNA cleavage and polyadenylation specificity factor complex subunit.
    
 0.999
CFT1
Protein CFT1; RNA-binding component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation- dependent pre-mRNA 3'-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB. Involved in poly(A) site recognition. May be involved in coupling transcription termination and mRNA 3'-end formation (By similarity); Belongs to the CFT1 family.
    
 0.999
CIMG_04249
Zinc knuckle domain-containing protein.
   
 0.998
CIMG_09164
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
   
 0.997
CIMG_09344
WD repeat protein.
  
 0.997
CIMG_04481
RNA polymerase II subunit A domain phosphatase ssu72.
    
 0.996
CIMG_04906
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.995
Your Current Organism:
Coccidioides immitis RS
NCBI taxonomy Id: 246410
Other names: C. immitis RS
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.