Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CIMG_00757 | CIMG_05425 | J3KHN8 | J3KFJ2 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. | 0.983 |
CIMG_00757 | CIMG_05906 | J3KHN8 | J3K716 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 60S ribosomal protein L5. | 0.987 |
CIMG_00757 | CIMG_06370 | J3KHN8 | J3K809 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 60S ribosomal protein L25. | 0.983 |
CIMG_00757 | CIMG_07888 | J3KHN8 | J3K4C3 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 60S ribosomal protein L7. | 0.934 |
CIMG_00757 | CIMG_08196 | J3KHN8 | J3K509 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.997 |
CIMG_00757 | CIMG_08333 | J3KHN8 | A0A0E1RVD5 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.995 |
CIMG_00757 | CIMG_08959 | J3KHN8 | J3K1B7 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | GTP-binding protein. | 0.928 |
CIMG_00757 | CIMG_08963 | J3KHN8 | J3K1B9 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 60S ribosomal protein L35. | 0.852 |
CIMG_00757 | CIMG_09441 | J3KHN8 | J3K2D4 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | DNA-binding protein, 42 kDa. | 0.988 |
CIMG_00757 | CIMG_09450 | J3KHN8 | J3K2D9 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.623 |
CIMG_05425 | CIMG_00757 | J3KFJ2 | J3KHN8 | 60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 0.983 |
CIMG_05425 | CIMG_05906 | J3KFJ2 | J3K716 | 60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. | 60S ribosomal protein L5. | 0.999 |
CIMG_05425 | CIMG_06370 | J3KFJ2 | J3K809 | 60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. | 60S ribosomal protein L25. | 0.999 |
CIMG_05425 | CIMG_07888 | J3KFJ2 | J3K4C3 | 60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. | 60S ribosomal protein L7. | 0.999 |
CIMG_05425 | CIMG_08196 | J3KFJ2 | J3K509 | 60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.988 |
CIMG_05425 | CIMG_08333 | J3KFJ2 | A0A0E1RVD5 | 60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.953 |
CIMG_05425 | CIMG_08959 | J3KFJ2 | J3K1B7 | 60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. | GTP-binding protein. | 0.904 |
CIMG_05425 | CIMG_08963 | J3KFJ2 | J3K1B9 | 60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. | 60S ribosomal protein L35. | 0.999 |
CIMG_05425 | CIMG_09441 | J3KFJ2 | J3K2D4 | 60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. | DNA-binding protein, 42 kDa. | 0.992 |
CIMG_05425 | CIMG_09450 | J3KFJ2 | J3K2D9 | 60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.941 |
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