Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASF1 | CIMG_00519 | Q1E0W9 | J3KH64 | Histone chaperone ASF1; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. | HUN domain-containing protein. | 0.877 |
ASF1 | HIR1 | Q1E0W9 | Q1DHE1 | Histone chaperone ASF1; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. | Protein HIR1; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | 0.999 |
CIMG_00519 | ASF1 | J3KH64 | Q1E0W9 | HUN domain-containing protein. | Histone chaperone ASF1; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. | 0.877 |
CIMG_00519 | CIMG_03454 | J3KH64 | A0A0E1S2T2 | HUN domain-containing protein. | Transcriptional corepressor for histone genes (Hir3). | 0.506 |
CIMG_00519 | HIR1 | J3KH64 | Q1DHE1 | HUN domain-containing protein. | Protein HIR1; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | 0.922 |
CIMG_03454 | CIMG_00519 | A0A0E1S2T2 | J3KH64 | Transcriptional corepressor for histone genes (Hir3). | HUN domain-containing protein. | 0.506 |
CIMG_03454 | HIR1 | A0A0E1S2T2 | Q1DHE1 | Transcriptional corepressor for histone genes (Hir3). | Protein HIR1; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | 0.523 |
HIR1 | ASF1 | Q1DHE1 | Q1E0W9 | Protein HIR1; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | Histone chaperone ASF1; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. | 0.999 |
HIR1 | CIMG_00519 | Q1DHE1 | J3KH64 | Protein HIR1; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | HUN domain-containing protein. | 0.922 |
HIR1 | CIMG_03454 | Q1DHE1 | A0A0E1S2T2 | Protein HIR1; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | Transcriptional corepressor for histone genes (Hir3). | 0.523 |