STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIMG_01164HECT domain-containing protein. (1350 aa)    
Predicted Functional Partners:
CIMG_01344
Ubiquitin-protein ligase Ufd4.
   
 
0.744
CIMG_03463
Ubiquitin conjugating enzyme.
    
 0.609
CIMG_02361
26S proteasome regulatory subunit S5A.
    
 
 0.516
CIMG00292
Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family.
   
 0.510
CIMG_01736
RBR-type E3 ubiquitin transferase.
     
 0.486
CIMG_12978
AN1-type domain-containing protein.
   
 0.472
CIMG_06202
UV excision repair protein Rad23.
    
 0.472
CIMG00568
Polyubiquitin.
   
 0.472
CIMG_05868
Ubiquitin-conjugating enzyme E2 13, variant; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.445
CIMG_00209
Ubiquitin-conjugating enzyme.
    
 0.433
Your Current Organism:
Coccidioides immitis RS
NCBI taxonomy Id: 246410
Other names: C. immitis RS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.