Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CIMG03943-2 | CIMG_01243 | A0A0D8JXC0 | J3KIR9 | Zinc_ribbon_16 domain-containing protein. | Uncharacterized protein. | 0.626 |
CIMG03943-2 | CIMG_03048 | A0A0D8JXC0 | A0A0D8JWC5 | Zinc_ribbon_16 domain-containing protein. | GTP-binding protein GTR2, variant. | 0.941 |
CIMG03943-2 | CIMG_04567 | A0A0D8JXC0 | J3KDS4 | Zinc_ribbon_16 domain-containing protein. | WD repeat protein. | 0.999 |
CIMG03943-2 | CIMG_04941 | A0A0D8JXC0 | J3KEJ5 | Zinc_ribbon_16 domain-containing protein. | Nitrogen permease regulator Npr2. | 0.997 |
CIMG03943-2 | CIMG_05867 | A0A0D8JXC0 | J3K6Y6 | Zinc_ribbon_16 domain-containing protein. | WD repeat protein. | 0.999 |
CIMG03943-2 | CIMG_06655 | A0A0D8JXC0 | J3K8L9 | Zinc_ribbon_16 domain-containing protein. | Small GTP-binding protein. | 0.955 |
CIMG03943-2 | CIMG_08207 | A0A0D8JXC0 | J3K519 | Zinc_ribbon_16 domain-containing protein. | Nuclear pore protein; Belongs to the WD repeat SEC13 family. | 0.998 |
CIMG03943-2 | IML1 | A0A0D8JXC0 | Q1E9Q9 | Zinc_ribbon_16 domain-containing protein. | Vacuolar membrane-associated protein IML1. | 0.997 |
CIMG03943-2 | NPR3 | A0A0D8JXC0 | Q1DHE5 | Zinc_ribbon_16 domain-containing protein. | Nitrogen permease regulator 3; Mediates inactivation of the TORC1 complex in response to amino acid starvation. Required for meiotic nuclear division (By similarity). | 0.983 |
CIMG03943-2 | SEC13 | A0A0D8JXC0 | Q1DZQ0 | Zinc_ribbon_16 domain-containing protein. | Protein transport protein SEC13; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport facto [...] | 0.998 |
CIMG_01243 | CIMG03943-2 | J3KIR9 | A0A0D8JXC0 | Uncharacterized protein. | Zinc_ribbon_16 domain-containing protein. | 0.626 |
CIMG_01243 | CIMG_03048 | J3KIR9 | A0A0D8JWC5 | Uncharacterized protein. | GTP-binding protein GTR2, variant. | 0.905 |
CIMG_01243 | CIMG_04567 | J3KIR9 | J3KDS4 | Uncharacterized protein. | WD repeat protein. | 0.618 |
CIMG_01243 | CIMG_04941 | J3KIR9 | J3KEJ5 | Uncharacterized protein. | Nitrogen permease regulator Npr2. | 0.825 |
CIMG_01243 | CIMG_05867 | J3KIR9 | J3K6Y6 | Uncharacterized protein. | WD repeat protein. | 0.630 |
CIMG_01243 | CIMG_06655 | J3KIR9 | J3K8L9 | Uncharacterized protein. | Small GTP-binding protein. | 0.915 |
CIMG_01243 | CIMG_08207 | J3KIR9 | J3K519 | Uncharacterized protein. | Nuclear pore protein; Belongs to the WD repeat SEC13 family. | 0.480 |
CIMG_01243 | IML1 | J3KIR9 | Q1E9Q9 | Uncharacterized protein. | Vacuolar membrane-associated protein IML1. | 0.744 |
CIMG_01243 | NPR3 | J3KIR9 | Q1DHE5 | Uncharacterized protein. | Nitrogen permease regulator 3; Mediates inactivation of the TORC1 complex in response to amino acid starvation. Required for meiotic nuclear division (By similarity). | 0.782 |
CIMG_01243 | SEC13 | J3KIR9 | Q1DZQ0 | Uncharacterized protein. | Protein transport protein SEC13; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport facto [...] | 0.563 |
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