STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEF1Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (800 aa)    
Predicted Functional Partners:
CIMG_08216
ATP binding L-PSP endoribonuclease.
   
 0.971
CIMG_08094
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
 
 0.889
CIMG_08963
60S ribosomal protein L35.
  
 0.885
CIMG_05906
60S ribosomal protein L5.
  
 0.885
CIMG_06370
60S ribosomal protein L25.
  
 0.885
CIMG_03903
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.885
CIMG_02223
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.885
CIMG_06811
Ribosomal protein S16.
  
 
 0.884
CIMG_09002
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
 
 
 0.883
CIMG_09015
Ribosomal protein S6.
  
 
 0.877
Your Current Organism:
Coccidioides immitis RS
NCBI taxonomy Id: 246410
Other names: C. immitis RS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.