Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CIMG_01739 | CIMG_01984 | J3KJU1 | J3KKD9 | Stress response transcription factor SrrA/Skn7. | Uncharacterized protein. | 0.421 |
CIMG_01739 | CIMG_03698 | J3KJU1 | J3KBY1 | Stress response transcription factor SrrA/Skn7. | BZIP transcription factor. | 0.421 |
CIMG_01739 | CIMG_04514 | J3KJU1 | J3KDN2 | Stress response transcription factor SrrA/Skn7. | CAMK/CAMK1/CAMK1-RCK protein kinase. | 0.417 |
CIMG_01739 | CIMG_07638 | J3KJU1 | J3K3T9 | Stress response transcription factor SrrA/Skn7. | SRF-type transcription factor RlmA. | 0.455 |
CIMG_01739 | HOG1 | J3KJU1 | Q1DUU8 | Stress response transcription factor SrrA/Skn7. | Mitogen-activated protein kinase HOG1; Mitogen-activated protein kinase involved in a signal transduction pathway that is activated by changes in the osmolarity of the extracellular environment. Controls osmotic regulation of transcription of target genes (By similarity); Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. HOG1 sub-subfamily. | 0.928 |
CIMG_01984 | CIMG_01739 | J3KKD9 | J3KJU1 | Uncharacterized protein. | Stress response transcription factor SrrA/Skn7. | 0.421 |
CIMG_01984 | HOG1 | J3KKD9 | Q1DUU8 | Uncharacterized protein. | Mitogen-activated protein kinase HOG1; Mitogen-activated protein kinase involved in a signal transduction pathway that is activated by changes in the osmolarity of the extracellular environment. Controls osmotic regulation of transcription of target genes (By similarity); Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. HOG1 sub-subfamily. | 0.877 |
CIMG_03086 | CIMG_08522 | J3KAK6 | A0A0E1S1A7 | STE/STE7 protein kinase. | Protein tyrosine phosphatase. | 0.628 |
CIMG_03086 | CIMG_09373 | J3KAK6 | J3K274 | STE/STE7 protein kinase. | Protein phosphatase 2C. | 0.721 |
CIMG_03086 | HOG1 | J3KAK6 | Q1DUU8 | STE/STE7 protein kinase. | Mitogen-activated protein kinase HOG1; Mitogen-activated protein kinase involved in a signal transduction pathway that is activated by changes in the osmolarity of the extracellular environment. Controls osmotic regulation of transcription of target genes (By similarity); Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. HOG1 sub-subfamily. | 0.994 |
CIMG_03698 | CIMG_01739 | J3KBY1 | J3KJU1 | BZIP transcription factor. | Stress response transcription factor SrrA/Skn7. | 0.421 |
CIMG_03698 | HOG1 | J3KBY1 | Q1DUU8 | BZIP transcription factor. | Mitogen-activated protein kinase HOG1; Mitogen-activated protein kinase involved in a signal transduction pathway that is activated by changes in the osmolarity of the extracellular environment. Controls osmotic regulation of transcription of target genes (By similarity); Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. HOG1 sub-subfamily. | 0.987 |
CIMG_04514 | CIMG_01739 | J3KDN2 | J3KJU1 | CAMK/CAMK1/CAMK1-RCK protein kinase. | Stress response transcription factor SrrA/Skn7. | 0.417 |
CIMG_04514 | HOG1 | J3KDN2 | Q1DUU8 | CAMK/CAMK1/CAMK1-RCK protein kinase. | Mitogen-activated protein kinase HOG1; Mitogen-activated protein kinase involved in a signal transduction pathway that is activated by changes in the osmolarity of the extracellular environment. Controls osmotic regulation of transcription of target genes (By similarity); Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. HOG1 sub-subfamily. | 0.905 |
CIMG_05853 | CIMG_09164 | A0A0E1S1J9 | A0A0E1RUP9 | CAMK/CAMKL/GIN4 protein kinase. | Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. | 0.932 |
CIMG_05853 | HOG1 | A0A0E1S1J9 | Q1DUU8 | CAMK/CAMKL/GIN4 protein kinase. | Mitogen-activated protein kinase HOG1; Mitogen-activated protein kinase involved in a signal transduction pathway that is activated by changes in the osmolarity of the extracellular environment. Controls osmotic regulation of transcription of target genes (By similarity); Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. HOG1 sub-subfamily. | 0.921 |
CIMG_07638 | CIMG_01739 | J3K3T9 | J3KJU1 | SRF-type transcription factor RlmA. | Stress response transcription factor SrrA/Skn7. | 0.455 |
CIMG_07638 | HOG1 | J3K3T9 | Q1DUU8 | SRF-type transcription factor RlmA. | Mitogen-activated protein kinase HOG1; Mitogen-activated protein kinase involved in a signal transduction pathway that is activated by changes in the osmolarity of the extracellular environment. Controls osmotic regulation of transcription of target genes (By similarity); Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. HOG1 sub-subfamily. | 0.848 |
CIMG_08522 | CIMG_03086 | A0A0E1S1A7 | J3KAK6 | Protein tyrosine phosphatase. | STE/STE7 protein kinase. | 0.628 |
CIMG_08522 | CIMG_09373 | A0A0E1S1A7 | J3K274 | Protein tyrosine phosphatase. | Protein phosphatase 2C. | 0.685 |
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