Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CIMG_00756 | CIMG_00987 | J3KHN7 | J3KI64 | Pre-mRNA-splicing factor cef1. | Pre-mRNA splicing factor. | 0.467 |
CIMG_00756 | CIMG_02263 | J3KHN7 | J3KKZ6 | Pre-mRNA-splicing factor cef1. | Small GTP-binding protein. | 0.994 |
CIMG_00756 | CIMG_06535 | J3KHN7 | A0A0E1RWT4 | Pre-mRNA-splicing factor cef1. | CID domain-containing protein. | 0.892 |
CIMG_00756 | MRH4 | J3KHN7 | Q1E9B7 | Pre-mRNA-splicing factor cef1. | ATP-dependent RNA helicase MRH4, mitochondrial; ATP-binding RNA helicase involved in mitochondrial RNA metabolism. Required for maintenance of mitochondrial DNA (By similarity); Belongs to the DEAD box helicase family. MRH4 subfamily. | 0.593 |
CIMG_00987 | CIMG_00756 | J3KI64 | J3KHN7 | Pre-mRNA splicing factor. | Pre-mRNA-splicing factor cef1. | 0.467 |
CIMG_00987 | CIMG_02263 | J3KI64 | J3KKZ6 | Pre-mRNA splicing factor. | Small GTP-binding protein. | 0.999 |
CIMG_00987 | CIMG_06535 | J3KI64 | A0A0E1RWT4 | Pre-mRNA splicing factor. | CID domain-containing protein. | 0.864 |
CIMG_00987 | MRH4 | J3KI64 | Q1E9B7 | Pre-mRNA splicing factor. | ATP-dependent RNA helicase MRH4, mitochondrial; ATP-binding RNA helicase involved in mitochondrial RNA metabolism. Required for maintenance of mitochondrial DNA (By similarity); Belongs to the DEAD box helicase family. MRH4 subfamily. | 0.695 |
CIMG_02263 | CIMG_00756 | J3KKZ6 | J3KHN7 | Small GTP-binding protein. | Pre-mRNA-splicing factor cef1. | 0.994 |
CIMG_02263 | CIMG_00987 | J3KKZ6 | J3KI64 | Small GTP-binding protein. | Pre-mRNA splicing factor. | 0.999 |
CIMG_02263 | CIMG_05216 | J3KKZ6 | A0A0E1RXL4 | Small GTP-binding protein. | ATP synthase F1, delta subunit. | 0.667 |
CIMG_02263 | CIMG_05477 | J3KKZ6 | A0A0D8JVP0 | Small GTP-binding protein. | Elongation factor 3. | 0.801 |
CIMG_02263 | CIMG_06274 | J3KKZ6 | J3K7T4 | Small GTP-binding protein. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.577 |
CIMG_02263 | CIMG_06535 | J3KKZ6 | A0A0E1RWT4 | Small GTP-binding protein. | CID domain-containing protein. | 0.905 |
CIMG_02263 | CIMG_10089 | J3KKZ6 | A0A0E1RUF6 | Small GTP-binding protein. | mRNA-nucleus export ATPase. | 0.791 |
CIMG_02263 | MRH4 | J3KKZ6 | Q1E9B7 | Small GTP-binding protein. | ATP-dependent RNA helicase MRH4, mitochondrial; ATP-binding RNA helicase involved in mitochondrial RNA metabolism. Required for maintenance of mitochondrial DNA (By similarity); Belongs to the DEAD box helicase family. MRH4 subfamily. | 0.651 |
CIMG_05216 | CIMG_02263 | A0A0E1RXL4 | J3KKZ6 | ATP synthase F1, delta subunit. | Small GTP-binding protein. | 0.667 |
CIMG_05216 | CIMG_06274 | A0A0E1RXL4 | J3K7T4 | ATP synthase F1, delta subunit. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
CIMG_05216 | MRH4 | A0A0E1RXL4 | Q1E9B7 | ATP synthase F1, delta subunit. | ATP-dependent RNA helicase MRH4, mitochondrial; ATP-binding RNA helicase involved in mitochondrial RNA metabolism. Required for maintenance of mitochondrial DNA (By similarity); Belongs to the DEAD box helicase family. MRH4 subfamily. | 0.590 |
CIMG_05477 | CIMG_02263 | A0A0D8JVP0 | J3KKZ6 | Elongation factor 3. | Small GTP-binding protein. | 0.801 |
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