node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALM56080.1 | ALM56813.1 | SE1039_02970 | SE1039_10300 | 16S rRNA methyltransferase; Pfam: Methyltransferase small domain. | 16S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.455 |
ALM56080.1 | ALM57211.1 | SE1039_02970 | SE1039_14280 | 16S rRNA methyltransferase; Pfam: Methyltransferase small domain. | GTPase; Pfam: Elongation factor Tu GTP binding domain; Pfam: 50S ribosome-binding GTPase; TIGRFAM: GTPase_YqeH: ribosome biogenesis GTPase YqeH. | 0.521 |
ALM56080.1 | obg | SE1039_02970 | SE1039_14710 | 16S rRNA methyltransferase; Pfam: Methyltransferase small domain. | GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.543 |
ALM56080.1 | rplA | SE1039_02970 | SE1039_02940 | 16S rRNA methyltransferase; Pfam: Methyltransferase small domain. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.794 |
ALM56080.1 | rplJ | SE1039_02970 | SE1039_02950 | 16S rRNA methyltransferase; Pfam: Methyltransferase small domain. | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.789 |
ALM56080.1 | rplK | SE1039_02970 | SE1039_02930 | 16S rRNA methyltransferase; Pfam: Methyltransferase small domain. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.499 |
ALM56080.1 | rplL | SE1039_02970 | SE1039_02960 | 16S rRNA methyltransferase; Pfam: Methyltransferase small domain. | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.832 |
ALM56080.1 | rpoB | SE1039_02970 | SE1039_02980 | 16S rRNA methyltransferase; Pfam: Methyltransferase small domain. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.841 |
ALM56080.1 | rpoC | SE1039_02970 | SE1039_02990 | 16S rRNA methyltransferase; Pfam: Methyltransferase small domain. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.788 |
ALM56080.1 | rpsG | SE1039_02970 | SE1039_03020 | 16S rRNA methyltransferase; Pfam: Methyltransferase small domain. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.492 |
ALM56813.1 | ALM56080.1 | SE1039_10300 | SE1039_02970 | 16S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 16S rRNA methyltransferase; Pfam: Methyltransferase small domain. | 0.455 |
ALM56813.1 | ALM57211.1 | SE1039_10300 | SE1039_14280 | 16S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | GTPase; Pfam: Elongation factor Tu GTP binding domain; Pfam: 50S ribosome-binding GTPase; TIGRFAM: GTPase_YqeH: ribosome biogenesis GTPase YqeH. | 0.757 |
ALM56813.1 | obg | SE1039_10300 | SE1039_14710 | 16S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.445 |
ALM56813.1 | rplA | SE1039_10300 | SE1039_02940 | 16S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.609 |
ALM56813.1 | rplJ | SE1039_10300 | SE1039_02950 | 16S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.819 |
ALM56813.1 | rplL | SE1039_10300 | SE1039_02960 | 16S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.638 |
ALM56813.1 | rpoB | SE1039_10300 | SE1039_02980 | 16S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.835 |
ALM56813.1 | rpoC | SE1039_10300 | SE1039_02990 | 16S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.750 |
ALM57211.1 | ALM56080.1 | SE1039_14280 | SE1039_02970 | GTPase; Pfam: Elongation factor Tu GTP binding domain; Pfam: 50S ribosome-binding GTPase; TIGRFAM: GTPase_YqeH: ribosome biogenesis GTPase YqeH. | 16S rRNA methyltransferase; Pfam: Methyltransferase small domain. | 0.521 |
ALM57211.1 | ALM56813.1 | SE1039_14280 | SE1039_10300 | GTPase; Pfam: Elongation factor Tu GTP binding domain; Pfam: 50S ribosome-binding GTPase; TIGRFAM: GTPase_YqeH: ribosome biogenesis GTPase YqeH. | 16S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.757 |