STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALM56459.1Fe-S cluster assembly protein SufD; Pfam: Uncharacterized protein family (UPF0051); TIGRFAM: sufD: FeS assembly protein SufD. (435 aa)    
Predicted Functional Partners:
ALM56458.1
Iron ABC transporter ATP-binding protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter; TIGRFAM: sufC: FeS assembly ATPase SufC.
 
 0.998
ALM56460.1
Cysteine desulfurase; Pfam: Aminotransferase class-V; TIGRFAM: sufS: cysteine desulfurase, SufS family; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.997
ALM56461.1
Nitrogen-fixing protein NifU; Pfam: NifU-like N terminal domain; TIGRFAM: SUF_scaf_2: SUF system FeS assembly protein, NifU family.
 
  
 0.991
ALM56462.1
Fe-S cluster assembly protein SufB; Pfam: Uncharacterized protein family (UPF0051); TIGRFAM: sufB: FeS assembly protein SufB.
 
  
0.934
ALM56520.1
DNA methyltransferase; Pfam: Domain of unknown function DUF59.
 
   
 0.745
ALM56457.1
Hypothetical protein; Pfam: Domain of unknown function (DUF368).
       0.682
ALM56484.1
Hypothetical protein; TIGRFAM: TIGR00049: iron-sulfur cluster assembly accessory protein; Pfam: Iron-sulphur cluster biosynthesis; Belongs to the HesB/IscA family.
  
 
 0.554
Your Current Organism:
Staphylococcus equorum
NCBI taxonomy Id: 246432
Other names: ATCC 43958, CCUG 30109, CIP 103502, DSM 20674, NCTC 12414, NRRL B-14765, S. equorum, Staphylococcus sp. SR1, strain PA231
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.